STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49333.1Cyd operon protein YbgT; KEGG: cro:ROD_07282 hypothetical protein; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein. (37 aa)    
Predicted Functional Partners:
ADO49334.1
KEGG: enc:ECL_02998 cytochrome bd-I oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II.
  
 
 0.802
ADO49335.1
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: enc:ECL_02999 cytochrome bd-I oxidase subunit I.
  
 
 0.774
ADO48644.1
KEGG: esa:ESA_01936 hypothetical protein; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II.
  
 
 0.756
ADO48643.1
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: kpu:KP1_2996 cytochrome bd ubiquinol oxidase subunit I.
  
 
 0.735
ADO49348.1
KEGG: enc:ECL_03008 succinate dehydrogenase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
     
  0.499
ADO49349.1
KEGG: enc:ECL_03009 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
     
  0.499
ADO49351.1
KEGG: kva:Kvar_3643 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit.
     
  0.499
ADO50236.1
Manually curated; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: enc:ECL_00557 fumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
     
  0.499
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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