Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO49343.1PFAM: Cupin 2 conserved barrel domain protein; KEGG: enc:ECL_04168 hypothetical protein. (107 aa)    
Predicted Functional Partners:
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
  
  0.968
ADO49342.1
PFAM: Heparinase II/III family protein; KEGG: ypy:YPK_3711 heparinase II/III family protein.
 
   
 0.884
ADO49341.1
KEGG: kva:Kvar_1857 hypothetical protein.
 
    0.718
ADO49340.1
PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_01039 hexuronate transporter.
 
     0.658
ADO47157.1
KEGG: cko:CKO_04219 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR.
  
   
 0.522
ADO48148.1
PFAM: Ribose/galactose isomerase; KEGG: cro:ROD_19581 putative sugar phosphate isomerase.
 
     0.459
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
     0.456
ADO49984.1
Transcriptional regulator, XRE family; TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: helix-turn-helix domain protein; KEGG: cro:ROD_49131 transcriptional regulator; SMART: helix-turn-helix domain protein.
  
    0.422
ADO46999.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pct:PC1_0343 tripartite ATP-independent periplasmic transporter DctQ component.
 
     0.412
ADO49244.1
PFAM: major facilitator superfamily MFS_1; KEGG: cko:CKO_02296 hypothetical protein.
 
     0.403
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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