Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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dtpDAmino acid/peptide transporter; Probable proton-dependent permease that transports dipeptides; Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpD subfamily. (494 aa)    
Predicted Functional Partners:
ADO49360.1
PFAM: protein of unknown function DUF34; KEGG: kpe:KPK_3849 putative hydrolase-oxidase.
       0.446
ADO46899.1
PFAM: amino acid permease-associated region; KEGG: aha:AHA_0209 amino acid permease.
  
 
   0.437
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.432
ADO49358.1
Urea amidolyase related protein; SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: cko:CKO_02456 hypothetical protein; PFAM: Allophanate hydrolase subunit 2.
       0.432
ADO49359.1
Allophanate hydrolase subunit 1; KEGG: ybgJ; uncharacterized protein YbgJ; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1.
       0.432
ADO46898.1
PFAM: amino acid permease-associated region; KEGG: eoi:ECO111_3900 putative transporter.
  
 
   0.428
ADO47465.1
Transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; KEGG: kva:Kvar_3881 transcriptional regulator, CadC.
  
     0.412
ADO49765.1
Transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; KEGG: kpn:KPN_00498 DNA-binding transcriptional activator CadC.
  
     0.408
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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