Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO49423.1KEGG: enc:ECL_03075 ribonuclease I; Belongs to the RNase T2 family. (269 aa)    
Predicted Functional Partners:
ADO48658.1
KEGG: cko:CKO_01465 hypothetical protein.
  
     0.768
ADO49305.1
PFAM: Pectinesterase; KEGG: enc:ECL_02969 putative pectinesterase.
  
     0.765
ADO50007.1
KEGG: cro:ROD_48671 transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
  
     0.764
ADO46617.1
KEGG: kpu:KP1_5096 hypothetical protein.
  
     0.661
ADO47893.1
PFAM: glycosyl transferase group 1; KEGG: enc:ECL_03380 putative glycosyl transferase.
  
     0.661
ADO46485.1
KEGG: efe:EFER_3521 putative cellulose biosynthesis protease; manually curated; TIGRFAM: cellulose biosynthesis protein BcsE.
  
     0.647
sbmC
Transcription activator effector binding protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell.
  
     0.616
ADO49420.1
KEGG: efe:EFER_2482 C4-dicarboxylate transporter DcuC; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like.
 
     0.603
rpmB
KEGG: kva:Kvar_0123 ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
    
   0.579
rpmG
KEGG: ctu:Ctu_41410 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
    
   0.579
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.