STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49440.1PFAM: plasmid stabilization system; KEGG: kpu:KP1_1566 hypothetical protein. (100 aa)    
Predicted Functional Partners:
ADO49441.1
Helix-turn-helix domain protein; KEGG: kpu:KP1_1565 putative transcriptional regulators; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
     
 0.809
ADO47520.1
KEGG: cko:CKO_00281 hypothetical protein.
   
 
 0.646
ADO46318.1
Transcriptional regulator, XRE family; KEGG: set:SEN3600 putative DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
   
 
 0.427
ADO46463.1
Transcriptional regulator, XRE family; KEGG: sdy:SDY_4348 putative transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
   
 
 0.427
ADO49198.1
Transcriptional regulator, XRE family; KEGG: plu:plu2098 hypothetical protein.
   
 
 0.427
mtnK
5-methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.
       0.414
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.