Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ADO49467.1KEGG: kva:Kvar_3818 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (111 aa)    
Predicted Functional Partners:
ADO49468.1
KEGG: cko:CKO_02592 hypothetical protein.
       0.761
rhaR
Transcriptional regulator, AraC family; Activates expression of the rhaSR operon in response to L- rhamnose.
  
   0.711
rhaS
Transcriptional regulator, AraC family; Activates expression of the rhaBAD and rhaT operons.
 
 
 0.710
ADO46335.1
Transcriptional regulator, AraC family; KEGG: kpu:KP1_5395 putative AraC-type regulatory protein; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
   0.636
ADO50519.1
Transcriptional regulator, AraC family; KEGG: efe:EFER_3809 putative DNA-binding transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
   
 0.626
ADO49516.1
Transcriptional regulator, AraC family; KEGG: ecp:ECP_4361 DNA-binding transcriptional regulator MelR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.609
ADO49470.1
KEGG: enc:ECL_03156 hypothetical protein.
       0.595
ADO49469.1
PFAM: regulatory protein TetR; KEGG: kpu:KP1_1490 putative regulatory protein.
       0.592
ADO50191.1
KEGG: ent:Ent638_0382 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
   
 0.570
ADO49902.1
KEGG: cko:CKO_03318 DNA-binding transcriptional regulator AraC; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
   
 0.556
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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