STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49476.1KEGG: spe:Spro_2511 hypothetical protein. (368 aa)    
Predicted Functional Partners:
ADO49478.1
KEGG: kpe:KPK_2561 putative lipoprotein.
 
     0.954
ADO49477.1
PFAM: surface antigen (D15); KEGG: spe:Spro_2510 putative outer membrane protein.
 
     0.943
ADO49479.1
PFAM: surface antigen (D15); KEGG: vfi:VF_2363 hypothetical protein.
 
     0.913
ADO48686.1
KEGG: ppr:PBPRA1156 putative outer membrane lipoprotein.
  
     0.617
ADO46523.1
KEGG: eic:NT01EI_2984 hypothetical protein.
  
     0.603
ADO49472.1
KEGG: ent:Ent638_1073 putative integral membrane protein.
  
     0.581
ADO49694.1
PFAM: secretion protein HlyD family protein; KEGG: kpn:KPN_00517 putative secretion protein HlyD.
  
     0.570
ADO47039.1
TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: enc:ECL_04349 major facilitator superfamily oligosaccharide/H+ symporter.
  
     0.546
ADO48781.1
KEGG: kva:Kvar_3852 putative lipoprotein.
  
     0.537
ADO49475.1
PFAM: amino acid permease-associated region; KEGG: sek:SSPA2008 phenylalanine transporter.
       0.533
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.