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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49477.1PFAM: surface antigen (D15); KEGG: spe:Spro_2510 putative outer membrane protein. (376 aa)    
Predicted Functional Partners:
ADO49478.1
KEGG: kpe:KPK_2561 putative lipoprotein.
 
     0.945
ADO49476.1
KEGG: spe:Spro_2511 hypothetical protein.
 
     0.943
ADO49479.1
PFAM: surface antigen (D15); KEGG: vfi:VF_2363 hypothetical protein.
 
   
 0.929
ADO50180.1
PFAM: protein of unknown function DUF490; KEGG: cko:CKO_03609 hypothetical protein.
  
 
 0.730
ADO48516.1
KEGG: kva:Kvar_2511 hypothetical protein.
  
     0.611
ADO48681.1
KEGG: ent:Ent638_1943 hypothetical protein.
  
 
 0.607
ADO49475.1
PFAM: amino acid permease-associated region; KEGG: sek:SSPA2008 phenylalanine transporter.
       0.533
ADO50338.1
Lytic transglycosylase catalytic; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family.
  
    0.508
ADO48781.1
KEGG: kva:Kvar_3852 putative lipoprotein.
  
     0.457
ADO49694.1
PFAM: secretion protein HlyD family protein; KEGG: kpn:KPN_00517 putative secretion protein HlyD.
  
     0.449
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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