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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49479.1PFAM: surface antigen (D15); KEGG: vfi:VF_2363 hypothetical protein. (375 aa)    
Predicted Functional Partners:
ADO49478.1
KEGG: kpe:KPK_2561 putative lipoprotein.
 
     0.934
ADO49477.1
PFAM: surface antigen (D15); KEGG: spe:Spro_2510 putative outer membrane protein.
 
   
 0.929
ADO49476.1
KEGG: spe:Spro_2511 hypothetical protein.
 
     0.913
bamB
Outer membrane assembly lipoprotein YfgL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.789
ADO49707.1
PFAM: SmpA/OmlA domain-containing protein; OmpA/MotB domain protein; KEGG: bmj:BMULJ_04992 putative OmpA family transmembrane protein.
   
 
 0.778
bamD
Outer membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamA, the core component of the assembly machinery.
  
 
 0.757
ADO49802.1
TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: cro:ROD_01791 protease; SMART: PDZ/DHR/GLGF domain protein.
  
  
 0.756
ADO48516.1
KEGG: kva:Kvar_2511 hypothetical protein.
  
     0.742
bamC
Lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.741
ADO48686.1
KEGG: ppr:PBPRA1156 putative outer membrane lipoprotein.
  
 
 
 0.741
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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