Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO49479.1PFAM: surface antigen (D15); KEGG: vfi:VF_2363 hypothetical protein. (375 aa)    
Predicted Functional Partners:
ADO49478.1
KEGG: kpe:KPK_2561 putative lipoprotein.
 
     0.936
ADO49477.1
PFAM: surface antigen (D15); KEGG: spe:Spro_2510 putative outer membrane protein.
 
   
 0.928
ADO49476.1
KEGG: spe:Spro_2511 hypothetical protein.
 
     0.913
bamB
Outer membrane assembly lipoprotein YfgL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.828
bamD
Outer membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamA, the core component of the assembly machinery.
  
 
 0.803
bamC
Lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.796
ADO49707.1
PFAM: SmpA/OmlA domain-containing protein; OmpA/MotB domain protein; KEGG: bmj:BMULJ_04992 putative OmpA family transmembrane protein.
   
 
 0.770
ADO47235.1
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: enc:ECL_02201 putative fatty acid transport system, membrane protein.
  
 
 
 0.757
ADO48686.1
KEGG: ppr:PBPRA1156 putative outer membrane lipoprotein.
  
 
 
 0.751
nuoC
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
 
 0.745
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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