Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO49486.1KEGG: kpn:KPN_00531 hypothetical protein. (193 aa)    
Predicted Functional Partners:
ADO49487.1
PFAM: amino acid permease-associated region; KEGG: kpu:KP1_1459 putative amino acid/amine transport protein.
  
    0.844
ADO49488.1
PFAM: protein of unknown function DUF861 cupin_3; KEGG: kva:Kvar_3839 protein of unknown function DUF861 cupin_3.
  
    0.486
ADO49489.1
PFAM: FAD dependent oxidoreductase; KEGG: kpu:KP1_1462 hypothetical protein.
       0.444
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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