Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADO49491.1KEGG: kva:Kvar_1622 hypothetical protein. (166 aa)    
Predicted Functional Partners:
ADO49492.1
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: kpe:KPK_1732 diguanylate cyclase/cyclic diguanylate phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein.
       0.785
ADO48843.1
KEGG: kpn:KPN_01215 ABC transporter membrane protein.
  
     0.520
ADO48516.1
KEGG: kva:Kvar_2511 hypothetical protein.
  
     0.478
ADO49490.1
KEGG: pmy:Pmen_2228 chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter.
       0.438
ADO48846.1
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ect:ECIAI39_1296 putative phosphatidyl transferase, inner membrane protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.437
ADO48842.1
KEGG: kpe:KPK_3227 putative ABC transporter solute-binding protein.
  
     0.410
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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