STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49508.1PFAM: glycosyl hydrolase family 88; KEGG: cro:ROD_48241 hypothetical protein. (357 aa)    
Predicted Functional Partners:
ADO49509.1
KEGG: pct:PC1_3525 hypothetical protein.
 
   
 0.922
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.796
ADO49506.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: str:Sterm_4045 xylose isomerase domain protein TIM barrel.
 
    0.785
ADO47038.1
PFAM: Uncharacterised conserved protein UCP014753; KEGG: ctu:Ctu_14700 hypothetical protein.
 
     0.738
ADO47040.1
PFAM: glycosyl hydrolase family 88; KEGG: enc:ECL_04348 glycosyl hydrolase family protein.
  
     0.670
ADO49507.1
KEGG: cpe:CPE0196 PTS arbutin-like enzyme IIBC component; TIGRFAM: PTS system, alpha-glucoside-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site.
       0.661
ADO47157.1
KEGG: cko:CKO_04219 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR.
 
   
 0.625
uxaB
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: sfv:SFV_1580 altronate oxidoreductase; Belongs to the mannitol dehydrogenase family. UxaB subfamily.
 
    0.525
ADO49510.1
PFAM: Oligogalacturonate-specific porin; KEGG: ppf:Pput_1876 oligogalacturonate-specific porin.
       0.493
uxaC
KEGG: ctu:Ctu_04620 glucuronate isomerase; PFAM: Glucuronate isomerase.
 
   
 0.459
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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