STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49520.1KEGG: eic:NT01EI_1474 hypothetical protein; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like. (426 aa)    
Predicted Functional Partners:
ADO49519.1
Amidohydrolase; KEGG: eic:NT01EI_1473 amidohydrolase, putative; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein.
 
     0.911
ADO50252.1
Anaerobic c4-dicarboxylate antiporter, Dcu family; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.
  
   
 0.667
ADO48151.1
Anaerobic c4-dicarboxylate antiporter, Dcu family; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.
  
   
 0.638
ADO46523.1
KEGG: eic:NT01EI_2984 hypothetical protein.
  
     0.511
ADO48880.1
PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: enc:ECL_02481 YbaK/prolyl-tRNA synthetase-associated domain protein.
  
     0.487
ADO49521.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: etr:ETAE_1356 DNA-binding transcriptional activator.
       0.466
ADO50558.1
PFAM: nucleoside recognition domain protein; KEGG: ses:SARI_03062 hypothetical protein.
  
     0.434
dmsD
Twin-argninine leader-binding protein DmsD; Required for biogenesis/assembly of DMSO reductase, but not for the interaction of the DmsA signal peptide with the Tat system. May be part of a chaperone cascade complex that facilitates a folding- maturation pathway for the substrate protein.
  
   
 0.427
ADO50557.1
PFAM: nucleoside recognition domain protein; KEGG: sew:SeSA_A4770 transporter gate domain protein.
  
     0.412
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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