STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49525.1KEGG: ent:Ent638_0991 minor fimbrial subunit. (333 aa)    
Predicted Functional Partners:
ADO49527.1
PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: ent:Ent638_0989 pili assembly chaperone.
  
 
 0.825
ADO49526.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: enc:ECL_01281 outer membrane usher protein.
  
   0.811
ADO49524.1
PFAM: Fimbrial protein domain-containing protein; KEGG: ent:Ent638_0992 putative fimbrial protein.
     
 0.746
ADO49528.1
PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_01279 fimbrial protein.
     
 0.645
ADO49529.1
PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_01278 major type 1 subunit fimbrin (pilin).
     
 0.482
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.