Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ADO49567.1PFAM: protein of unknown function DUF454; KEGG: ent:Ent638_0948 hypothetical protein. (125 aa)    
Predicted Functional Partners:
ADO49568.1
PFAM: Primosomal replication priB and priC; KEGG: efe:EFER_2550 primosomal replication protein N''.
       0.673
ADO49569.1
PFAM: Protein of unknown function DUF2496, YbaM-related; KEGG: cro:ROD_05241 hypothetical protein.
       0.611
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
       0.610
ADO47018.1
KEGG: kva:Kvar_0668 TonB-system energizer ExbB; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel.
  
    0.531
dnaX
DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
       0.477
ADO49564.1
Uncharacterized protein family UPF0133; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
       0.428
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.423
ADO47246.1
KEGG: enc:ECL_04076 hypothetical protein.
 
     0.416
ADO49824.1
ABC transporter related protein; KEGG: sdy:SDY_0167 iron-hydroxamate transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
    0.400
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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