Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADO49574.1PFAM: Biofilm formation regulator YbaJ; KEGG: cko:CKO_02690 hypothetical protein. (124 aa)    
Predicted Functional Partners:
ADO49575.1
PFAM: Haemolysin expression modulating family protein; KEGG: sdy:SDY_0459 hemolysin expression-modulating protein.
 
  
 0.992
uspB
PFAM: Universal stress protein B; KEGG: kva:Kvar_0242 universal stress protein B.
  
   
 0.776
ADO48938.1
PFAM: protein of unknown function DUF1425; KEGG: ent:Ent638_1619 hypothetical protein.
  
     0.774
ADO50577.1
PFAM: protein of unknown function Spy-related; KEGG: sew:SeSA_A4277 periplasmic repressor CpxP.
  
    0.774
tus
DNA replication terminus site-binding protein; Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the terminator sequence; Belongs to the Tus family.
  
     0.771
ADO48784.1
PFAM: protein of unknown function UPF0259; KEGG: enc:ECL_01650 hypothetical protein.
  
     0.771
ADO48969.1
Anti-sigma-28 factor, FlgM; KEGG: cro:ROD_11381 negative regulator of flagellin synthesis (anti-sigma factor); TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein.
  
     0.771
ADO46749.1
PFAM: protein of unknown function DUF1471; KEGG: ent:Ent638_3673 hypothetical protein.
  
   
 0.769
mzrA
Hypothetical protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
     0.768
ADO47494.1
KEGG: ent:Ent638_3019 enhanced serine sensitivity protein SseB.
  
     0.768
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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