STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49575.1PFAM: Haemolysin expression modulating family protein; KEGG: sdy:SDY_0459 hemolysin expression-modulating protein. (72 aa)    
Predicted Functional Partners:
ADO49574.1
PFAM: Biofilm formation regulator YbaJ; KEGG: cko:CKO_02690 hypothetical protein.
 
  
 0.984
ADO48324.1
KEGG: enc:ECL_01633 H-NS protein; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; Belongs to the histone-like protein H-NS family.
  
 
 0.945
ADO47324.1
KEGG: efe:EFER_0403 DNA binding protein, nucleoid-associated; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; Belongs to the histone-like protein H-NS family.
  
 
 0.791
ADO48203.1
PFAM: DNA polymerase II beta subunit; KEGG: enc:ECL_01454 DNA polymerase III subunit theta.
  
     0.773
ADO48494.1
PFAM: protein of unknown function DUF1471; KEGG: kpu:KP1_2535 hypothetical protein.
  
     0.771
ADO48206.1
PFAM: Protein of unknown function DUF2511; KEGG: kva:Kvar_1753 protein of unknown function DUF2511.
  
     0.761
ADO48380.1
PFAM: LPP repeat-containing protein; KEGG: kpu:KP1_3230 murein lipoprotein.
  
    0.760
ADO48083.1
PFAM: Protein of unknown function DUF2594; KEGG: kva:Kvar_1694 protein of unknown function DUF2594.
  
     0.759
wzyE
WzyE family protein; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family.
  
     0.759
wecF
4-alpha-L-fucosyltransferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltransferase 56 family.
  
     0.758
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.