STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49583.1PFAM: protein of unknown function DUF1428; KEGG: cko:CKO_02698 hypothetical protein. (117 aa)    
Predicted Functional Partners:
lacZ
PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: enc:ECL_01221 beta galactosidase; Belongs to the glycosyl hydrolase 2 family.
       0.588
ADO46360.1
PFAM: AsmA family protein; KEGG: enc:ECL_00105 hypothetical protein.
   
    0.434
ADO47887.1
PFAM: AsmA family protein; KEGG: kva:Kvar_1546 AsmA family protein.
   
    0.434
ADO49590.1
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: enc:ECL_03089 activator of HSP90 ATPase 1 family protein.
 
     0.432
ADO49585.1
Transcriptional regulator, LacI family; KEGG: enc:ECL_01220 lac repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI.
       0.407
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.