Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADO49591.1KEGG: pam:PANA_1169 hypothetical protein. (185 aa)    
Predicted Functional Partners:
ADO48577.1
PFAM: protein of unknown function DUF1283; KEGG: ses:SARI_01439 hypothetical protein; Belongs to the UPF0482 family.
  
  
 0.723
ADO49592.1
PFAM: protein of unknown function DUF156; KEGG: cro:ROD_29021 hypothetical protein.
  
    0.626
ADO49590.1
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: enc:ECL_03089 activator of HSP90 ATPase 1 family protein.
       0.561
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.463
ADO49474.1
PFAM: major facilitator superfamily MFS_1; KEGG: kpu:KP1_1476 probable major facilitator superfamily (MFS) transporter.
  
     0.442
ADO49593.1
PFAM: high-affinity nickel-transporter; KEGG: eck:EC55989_2361 nickel/cobalt efflux protein RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family.
       0.410
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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