Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADO49628.1PFAM: inner-membrane translocator; KEGG: ebr:ECB_02651 ribose transport system permease protein RbsC. (327 aa)    
Predicted Functional Partners:
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.998
ADO50407.1
Manually curated; PFAM: ABC transporter related; KEGG: pst:PSPTO_2368 ribose ABC transporter, ATP-binding protein; SMART: AAA ATPase.
 0.987
ADO46445.1
KEGG: spe:Spro_3929 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.976
rbsA-3
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.968
rbsA-2
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  0.947
ADO49629.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: cro:ROD_28431 putative ABC transporter periplasmic binding protein.
 
 0.939
ADO50315.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: enc:ECL_00343 ribose ABC superfamily ATP binding protein.
 
 0.921
ADO50631.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: efe:EFER_4050 D-ribose transporter subunit RbsB.
 
 0.865
ADO47527.1
ABC transporter related protein; KEGG: enc:ECL_03805 ribose transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.857
ADO47526.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: enc:ECL_03806 ribose transport system substrate-binding protein.
 
 
 0.848
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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