Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADO49646.1PFAM: Nucleoside-specific channel-forming protein, Tsx-like; KEGG: kva:Kvar_4018 nucleoside-specific channel-forming protein, Tsx-like protein. (297 aa)    
Predicted Functional Partners:
aaeB
Fusaric acid resistance protein conserved region; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family.
  
     0.725
ADO46874.1
KEGG: cko:CKO_04501 hypothetical protein.
  
     0.693
ADO50180.1
PFAM: protein of unknown function DUF490; KEGG: cko:CKO_03609 hypothetical protein.
  
     0.692
ADO50261.1
Virulence-related outer membrane protein; KEGG: eic:NT01EI_3043 hypothetical protein; manually curated; PFAM: virulence-related outer membrane protein.
  
   
 0.652
ADO48799.1
PFAM: SmpA/OmlA domain-containing protein; KEGG: ent:Ent638_1705 DNA-binding transcriptional activator OsmE.
  
   
 0.620
ADO48978.1
PFAM: DinI family protein; KEGG: enc:ECL_02577 DNA damage-inducible protein I.
  
     0.605
ADO48616.1
PFAM: protein of unknown function DUF903; KEGG: kva:Kvar_2398 protein of unknown function DUF903.
  
     0.574
ADO46712.1
PFAM: protein of unknown function DUF1488; KEGG: ecz:ECS88_3668 hypothetical protein.
  
     0.570
mukB
Chromosome segregation and condensation protein MukB domain protein; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily.
  
     0.569
ADO48784.1
PFAM: protein of unknown function UPF0259; KEGG: enc:ECL_01650 hypothetical protein.
  
     0.554
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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