STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49647.1KEGG: cro:ROD_04591 putative DeoR-family transcriptional regulator. (230 aa)    
Predicted Functional Partners:
ADO49648.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kva:Kvar_4020 glyoxalase/bleomycin resistance protein/dioxygenase.
 
    0.943
ADO49649.1
KEGG: yen:YE2832 hypothetical protein.
       0.545
secF
Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
       0.426
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
       0.416
ADO46938.1
PFAM: Nucleotidyltransferase, predicted; KEGG: ecr:ECIAI1_4247 hypothetical protein.
 
     0.409
ADO46939.1
PFAM: protein of unknown function UPF0027; KEGG: cro:ROD_37281 hypothetical protein.
 
     0.408
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.