Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADO49682.1PFAM: SbmABacA family protein; KEGG: sei:SPC_0386 transport protein. (406 aa)    
Predicted Functional Partners:
ADO49681.1
PFAM: protein of unknown function DUF1615; KEGG: kpn:KPN_00320 hypothetical protein.
 
  
 0.841
ADO47567.1
PFAM: protein of unknown function DUF1176; KEGG: enc:ECL_03763 hypothetical protein.
 
     0.542
ADO49683.1
PFAM: isochorismatase hydrolase; KEGG: kva:Kvar_4063 isochorismatase hydrolase.
       0.519
ADO48799.1
PFAM: SmpA/OmlA domain-containing protein; KEGG: ent:Ent638_1705 DNA-binding transcriptional activator OsmE.
  
     0.423
ADO47590.1
KEGG: kpu:KP1_4024 hypothetical protein.
  
     0.406
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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