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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49693.1KEGG: vha:VIBHAR_05112 hypothetical protein. (125 aa)    
Predicted Functional Partners:
ADO49694.1
PFAM: secretion protein HlyD family protein; KEGG: kpn:KPN_00517 putative secretion protein HlyD.
 
     0.950
ADO46425.1
PFAM: secretion protein HlyD family protein; KEGG: enc:ECL_00173 secretion protein HlyD family protein.
 
     0.777
ADO47035.1
PFAM: secretion protein HlyD family protein; KEGG: sea:SeAg_B3899 secretion protein HlyD family protein.
 
     0.777
ADO48854.1
PFAM: porin Gram-negative type; KEGG: ses:SARI_00441 hypothetical protein.
  
     0.562
ADO49479.1
PFAM: surface antigen (D15); KEGG: vfi:VF_2363 hypothetical protein.
  
     0.524
ADO49476.1
KEGG: spe:Spro_2511 hypothetical protein.
  
     0.516
ADO48686.1
KEGG: ppr:PBPRA1156 putative outer membrane lipoprotein.
  
     0.506
ADO48934.1
PFAM: protein of unknown function UPF0227; KEGG: ent:Ent638_1623 hypothetical protein; Belongs to the UPF0227 family.
  
     0.490
ADO49695.1
KEGG: cko:CKO_01690 hypothetical protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
       0.483
ADO49696.1
KEGG: ent:Ent638_1778 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.483
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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