STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49746.1PFAM: BCCT transporter; KEGG: carnitine transporter CniT; Belongs to the BCCT transporter (TC 2.A.15) family. (509 aa)    
Predicted Functional Partners:
ADO49747.1
Hypothetical protein; KEGG: zma:100217046 LOC100217046.
       0.705
ADO49748.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ecm:EcSMS35_4861 dihydrolipoamide dehydrogenase CglE.
       0.564
ADO49749.1
PFAM: major facilitator superfamily MFS_1; KEGG: ecv:APECO1_2101 putative transporter.
       0.515
ADO49012.1
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.470
ADO47342.1
Na+/H+ antiporter NhaC; KEGG: ect:ECIAI39_2452 hypothetical protein; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like.
  
   
 0.454
ADO46726.1
Sodium/pantothenate symporter; KEGG: kva:Kvar_0432 SSS sodium solute transporter superfamily; TIGRFAM: sodium/pantothenate symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.440
ADO49739.1
Na+/H+ antiporter NhaC; KEGG: ecv:APECO1_2092 putative transporter IbeT; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like.
  
   
 0.420
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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