Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO49754.1PFAM: protein of unknown function UPF0118; KEGG: kva:Kvar_4154 hypothetical protein. (369 aa)    
Predicted Functional Partners:
ADO49756.1
PFAM: secretion protein HlyD family protein; KEGG: shn:Shewana3_2912 secretion protein HlyD family protein.
 
    0.905
ADO49758.1
PFAM: Ion transport 2 domain protein; KEGG: shn:Shewana3_2914 ion transport 2 domain-containing protein.
 
     0.897
ADO49755.1
KEGG: shm:Shewmr7_2820 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
 
     0.867
ADO49757.1
KEGG: she:Shewmr4_2744 hypothetical protein.
     
 0.790
ADO49479.1
PFAM: surface antigen (D15); KEGG: vfi:VF_2363 hypothetical protein.
  
     0.677
ADO49851.1
KEGG: ent:Ent638_0663 putative periplasmic protein.
  
 
   0.655
ADO47236.1
KEGG: ebi:EbC_21190 NapD-like protein.
 
     0.597
ADO48516.1
KEGG: kva:Kvar_2511 hypothetical protein.
  
     0.596
ADO50338.1
Lytic transglycosylase catalytic; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family.
  
     0.588
ADO49694.1
PFAM: secretion protein HlyD family protein; KEGG: kpn:KPN_00517 putative secretion protein HlyD.
 
    0.562
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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