STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49764.1KEGG: kpu:KP1_1409 lysine/cadaverine antiporter; TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region. (445 aa)    
Predicted Functional Partners:
ADO49763.1
KEGG: kpu:KP1_1410 lysine decarboxylase 1; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein.
 
  
 0.777
ADO49765.1
Transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; KEGG: kpn:KPN_00498 DNA-binding transcriptional activator CadC.
 
     0.758
ADO47465.1
Transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; KEGG: kva:Kvar_3881 transcriptional regulator, CadC.
 
   
 0.617
ADO47463.1
KEGG: kva:Kvar_3879 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein.
 
  
 0.536
ADO49792.1
Lysine decarboxylase; KEGG: cko:CKO_03180 hypothetical protein; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein.
 
  
 0.447
ADO48567.1
PFAM: amino acid permease-associated region; KEGG: etr:ETAE_0784 putative glutamate/gamma-aminobutyrate anti-porter.
  
     0.443
arcA
TIGRFAM: arginine deiminase; KEGG: sea:SeAg_B4751 arginine deiminase; PFAM: amidinotransferase.
 
  
 0.438
ADO50285.1
KEGG: sew:SeSA_A4551 biodegradative arginine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein.
 
  
 0.425
ADO49370.1
KEGG: cko:CKO_02469 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein.
 
  
 0.423
ADO49420.1
KEGG: efe:EFER_2482 C4-dicarboxylate transporter DcuC; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like.
  
     0.411
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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