Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO49785.1KEGG: kva:Kvar_4175 copper resistance lipoprotein NlpE. (231 aa)    
Predicted Functional Partners:
ADO50579.1
Integral membrane sensor signal transduction histidine kinase; KEGG: kpu:KP1_0078 two-component sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.
     
 0.932
ADO49786.1
PFAM: Class I peptide chain release factor; KEGG: cko:CKO_03174 peptidyl-tRNA hydrolase domain protein.
  
    0.716
ADO46964.1
PFAM: Antirestriction protein; KEGG: ecm:EcSMS35_0307 antirestriction protein.
  
     0.703
ADO50074.1
PFAM: Antirestriction protein; KEGG: ecm:EcSMS35_0307 antirestriction protein.
  
     0.700
ADO49787.1
PFAM: YaeQ family protein; KEGG: kpe:KPK_4530 hypothetical protein.
       0.695
ADO46960.1
KEGG: ebw:BWG_0234 CP4-6 prophage; hypothetical protein.
  
     0.652
ADO50079.1
KEGG: ebw:BWG_0234 CP4-6 prophage; hypothetical protein.
  
     0.649
ADO46789.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: kva:Kvar_0505 protein of unknown function DUF6 transmembrane.
  
     0.625
ADO47561.1
PFAM: phospholipase/Carboxylesterase; KEGG: cko:CKO_00314 esterase YpfH.
  
     0.604
ADO48492.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: efe:EFER_1431 short chain dehydrogenase.
  
     0.592
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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