STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49788.1PFAM: protein of unknown function UPF0253; KEGG: cko:CKO_03176 hypothetical protein; Belongs to the UPF0253 family. (66 aa)    
Predicted Functional Partners:
ADO49789.1
Transcriptional antiterminator, Rof; PFAM: Modulator of Rho-dependent transcription termination; KEGG: sdy:SDY_0207 Rho-binding antiterminator.
     
 0.874
ADO48978.1
PFAM: DinI family protein; KEGG: enc:ECL_02577 DNA damage-inducible protein I.
  
     0.757
ADO49724.1
KEGG: enc:ECL_01069 fermentation/respiration switch protein; Belongs to the UPF0255 family.
  
     0.712
ADO49380.1
PFAM: outer membrane porin; KEGG: kpe:KPK_3870 outer membrane porin, OprD family.
  
     0.681
ADO48993.1
PFAM: protein of unknown function DUF1097; KEGG: cko:CKO_02033 hypothetical protein.
  
     0.669
ADO47816.1
PFAM: protein of unknown function DUF1097; KEGG: sdy:SDY_1001 hypothetical protein.
  
     0.666
mukB
Chromosome segregation and condensation protein MukB domain protein; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily.
  
     0.598
ADO50510.1
PFAM: protein of unknown function DUF1422; KEGG: cko:CKO_03028 hypothetical protein.
  
     0.591
ADO49785.1
KEGG: kva:Kvar_4175 copper resistance lipoprotein NlpE.
 
     0.581
ADO47696.1
PFAM: YfbU family protein; KEGG: kpu:KP1_3931 hypothetical protein; Belongs to the UPF0304 family.
  
     0.580
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.