Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO49789.1Transcriptional antiterminator, Rof; PFAM: Modulator of Rho-dependent transcription termination; KEGG: sdy:SDY_0207 Rho-binding antiterminator. (86 aa)    
Predicted Functional Partners:
ADO49788.1
PFAM: protein of unknown function UPF0253; KEGG: cko:CKO_03176 hypothetical protein; Belongs to the UPF0253 family.
     
 0.874
lpoB
Membrane lipoprotein lipid attachment site; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). Belongs to the LpoB family.
  
   
 0.780
ADO47887.1
PFAM: AsmA family protein; KEGG: kva:Kvar_1546 AsmA family protein.
 
     0.775
ADO48681.1
KEGG: ent:Ent638_1943 hypothetical protein.
  
     0.767
ADO47072.1
KEGG: cko:CKO_04333 hypothetical protein.
  
     0.762
ADO47591.1
PFAM: protein of unknown function DUF1131; KEGG: efe:EFER_0740 hypothetical protein.
  
     0.762
ADO48787.1
KEGG: enc:ECL_02427 putative regulatory protein.
  
     0.761
ADO49987.1
PFAM: Virulence factor, haemolysin regulator; KEGG: cro:ROD_49101 hypothetical protein.
  
     0.761
rcsD
Hpt sensor signal transduction histidine kinase; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
  
     0.755
ADO48931.1
PFAM: Fimbrial protein domain-containing protein; KEGG: sbc:SbBS512_E4193 long polar fimbrial operon protein LpfA.
  
     0.751
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.