Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO49837.1PFAM: polysaccharide deacetylase; KEGG: kpe:KPK_4598 polysaccharide deacetylase domain protein. (415 aa)    
Predicted Functional Partners:
ADO49838.1
PFAM: PTS system fructose subfamily IIA component; KEGG: kva:Kvar_4245 PTS system fructose subfamily IIA component.
 
     0.714
ADO49169.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: kpu:KP1_1866 putative oxidoreductase.
 
  
 0.547
ADO46449.1
Manually curated; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; KEGG: efe:EFER_3568 hypothetical protein; SMART: Lysozyme subfamily 2.
 
     0.494
arnA
NAD-dependent epimerase/dehydratase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the N-terminal section; belongs to the Fmt family. UDP- L-Ara4N formyltransferase subfamily.
  
  
 0.487
ADO46617.1
KEGG: kpu:KP1_5096 hypothetical protein.
  
     0.473
ADO49305.1
PFAM: Pectinesterase; KEGG: enc:ECL_02969 putative pectinesterase.
  
   
 0.470
ADO48658.1
KEGG: cko:CKO_01465 hypothetical protein.
 
     0.459
ADO47271.1
KEGG: ebw:BWG_0250 putative glucosyltransferase; manually curated; PFAM: glycosyl transferase family 2.
  
  
 0.446
ADO49380.1
PFAM: outer membrane porin; KEGG: kpe:KPK_3870 outer membrane porin, OprD family.
  
     0.445
sbmC
Transcription activator effector binding protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell.
  
     0.432
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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