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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49845.1KEGG: enc:ECL_00927 hypothetical protein. (128 aa)    
Predicted Functional Partners:
rcsF
Outer membrane lipoprotein; Essential component of the Rcs signaling system, which controls transcription of numerous genes. Plays a role in signal transduction from the cell surface to the histidine kinase RcsC. May detect outer membrane defects; Belongs to the RcsF family.
  
     0.772
ADO47072.1
KEGG: cko:CKO_04333 hypothetical protein.
  
     0.771
ADO47176.1
KEGG: kpe:KPK_0880 hypothetical protein.
  
   
 0.771
ADO47322.1
PFAM: Protein of unknown function DUF2002; KEGG: kva:Kvar_1068 protein of unknown function DUF2002.
  
     0.771
ADO48681.1
KEGG: ent:Ent638_1943 hypothetical protein.
  
     0.771
ADO48787.1
KEGG: enc:ECL_02427 putative regulatory protein.
  
     0.771
ADO46371.1
PFAM: protein of unknown function DUF1454; KEGG: kva:Kvar_0097 protein of unknown function DUF1454.
  
     0.770
ADO47562.1
KEGG: enc:ECL_03770 hypothetical protein.
  
     0.769
ADO46291.1
PFAM: protein of unknown function DUF1375; KEGG: enc:ECL_00014 hypothetical protein.
  
     0.768
secM
Secretion monitor family proten; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.768
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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