STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO49848.1PFAM: Uncharacterised conserved protein UCP006287; KEGG: enc:ECL_00919 hypothetical protein; Belongs to the UPF0231 family. (120 aa)    
Predicted Functional Partners:
ADO48976.1
KEGG: cko:CKO_02000 hypothetical protein.
  
     0.757
ADO50510.1
PFAM: protein of unknown function DUF1422; KEGG: cko:CKO_03028 hypothetical protein.
  
     0.755
ADO48787.1
KEGG: enc:ECL_02427 putative regulatory protein.
  
     0.747
ADO47072.1
KEGG: cko:CKO_04333 hypothetical protein.
  
     0.741
ADO48994.1
KEGG: efe:EFER_1895 hypothetical protein.
  
     0.720
ADO47591.1
PFAM: protein of unknown function DUF1131; KEGG: efe:EFER_0740 hypothetical protein.
  
     0.719
ADO46556.1
PFAM: protein of unknown function DUF1145; KEGG: kva:Kvar_0269 protein of unknown function DUF1145.
  
     0.716
secM
Secretion monitor family proten; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.712
ADO46648.1
Transcriptional regulator, Crp/Fnr family; KEGG: pam:PANA_3653 Crp; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp.
    
   0.704
ADO46647.1
TIGRFAM: integral membrane protein, YccS/YhfK family; KEGG: enc:ECL_04735 YccS/YhfK family integral membrane protein.
  
     0.703
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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