Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADO49972.1PFAM: Lytic transglycosylase catalytic; KEGG: enc:ECL_00805 lytic murein transglycosylase. (645 aa)    
Predicted Functional Partners:
ADO47887.1
PFAM: AsmA family protein; KEGG: kva:Kvar_1546 AsmA family protein.
  
  
 0.796
trpR
Trp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region.
 
     0.729
ADO49789.1
Transcriptional antiterminator, Rof; PFAM: Modulator of Rho-dependent transcription termination; KEGG: sdy:SDY_0207 Rho-binding antiterminator.
  
     0.726
rcsD
Hpt sensor signal transduction histidine kinase; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
  
     0.655
ADO46736.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
   
 0.646
ADO48931.1
PFAM: Fimbrial protein domain-containing protein; KEGG: sbc:SbBS512_E4193 long polar fimbrial operon protein LpfA.
  
     0.639
ADO48681.1
KEGG: ent:Ent638_1943 hypothetical protein.
  
     0.632
ADO48465.1
PFAM: protein of unknown function DUF945; KEGG: ses:SARI_01512 hypothetical protein.
  
     0.630
ADO50000.1
DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.
  
     0.598
ADO49104.1
PFAM: porin Gram-negative type; KEGG: esa:ESA_02413 hypothetical protein.
  
     0.569
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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