Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADO49981.1KEGG: esa:ESA_03357 hypothetical protein. (365 aa)    
Predicted Functional Partners:
ADO49980.1
KEGG: svo:SVI_0622 hypothetical protein.
       0.737
ADO49983.1
ABC-2 type transporter; KEGG: ecq:ECED1_3602 polysialic acid transport protein; manually curated; PFAM: ABC-2 type transporter.
  
    0.645
ADO49979.1
PFAM: glycosyl transferase family 2; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: lmh:LMHCC_1548 glycosyl transferase, group 2 family protein.
 
  
 0.622
ADO49982.1
Manually curated; PFAM: ABC transporter related; KEGG: ecq:ECED1_3601 polysialic acid transport ATP-binding protein KpsT; SMART: AAA ATPase.
   
   0.595
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.586
ADO49978.1
KEGG: bmq:BMQ_1137 hypothetical protein.
       0.524
ADO49271.1
PFAM: Fimbrial protein domain-containing protein; KEGG: cko:CKO_02327 hypothetical protein.
  
     0.477
ADO47912.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.432
ADO47910.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.401
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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