Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO49996.1PFAM: protein of unknown function DUF1328; KEGG: ctu:Ctu_05910 hypothetical protein. (53 aa)    
Predicted Functional Partners:
ADO47304.1
KEGG: kva:Kvar_1046 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region.
  
  
 0.819
ADO48616.1
PFAM: protein of unknown function DUF903; KEGG: kva:Kvar_2398 protein of unknown function DUF903.
  
    0.737
ADO47167.1
PFAM: protein of unknown function DUF903; KEGG: kva:Kvar_0828 protein of unknown function DUF903.
   
    0.726
ADO49995.1
PFAM: Patatin; KEGG: ses:SARI_03015 hypothetical protein.
     
 0.699
ADO46825.1
KEGG: kpu:KP1_4864 hypothetical protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region.
  
    0.692
ADO49994.1
PFAM: TatD-related deoxyribonuclease; KEGG: kpn:KPN_04835 putative hydrolase.
       0.592
ADO48781.1
KEGG: kva:Kvar_3852 putative lipoprotein.
   
    0.551
ADO49516.1
Transcriptional regulator, AraC family; KEGG: ecp:ECP_4361 DNA-binding transcriptional regulator MelR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.516
wecH
Acyltransferase 3; Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units.
   
    0.512
ADO50299.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ent:Ent638_0310 hypothetical protein.
  
    0.494
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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