Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO50008.1PFAM: protein of unknown function DUF1212; KEGG: kpe:KPK_4800 hypothetical protein. (258 aa)    
Predicted Functional Partners:
ADO50009.1
KEGG: cro:ROD_48621 hypothetical protein.
  
 0.991
ADO49420.1
KEGG: efe:EFER_2482 C4-dicarboxylate transporter DcuC; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like.
  
     0.701
ADO50007.1
KEGG: cro:ROD_48671 transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
 
   
 0.686
ADO50011.1
SMART: AAA ATPase; KEGG: sec:SC4395 DNA replication protein DnaC.
       0.520
dnaT
Primosomal protein DnaI; This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with DnaB protein and other prepriming proteins DnaC, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N'.
       0.519
ADO47127.1
PFAM: protein of unknown function DUF437; KEGG: efe:EFER_2836 hypothetical protein; Belongs to the UPF0267 family.
  
     0.467
sbmC
Transcription activator effector binding protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell.
  
   
 0.454
ADO50006.1
Transcriptional regulator, LuxR family; KEGG: ent:Ent638_0524 DNA-binding transcriptional activator BglJ; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
     
 0.453
ADO48934.1
PFAM: protein of unknown function UPF0227; KEGG: ent:Ent638_1623 hypothetical protein; Belongs to the UPF0227 family.
  
     0.452
ADO46761.1
Anaerobic c4-dicarboxylate antiporter, DcuC family; KEGG: ebr:ECB_03087 putative cryptic C4-dicarboxylate transporter DcuD; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like.
  
     0.446
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.