STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO50035.1PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: kva:Kvar_4461 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (421 aa)    
Predicted Functional Partners:
ADO50033.1
PFAM: FAD dependent oxidoreductase; KEGG: kva:Kvar_4459 FAD dependent oxidoreductase.
 
 0.997
ADO50034.1
KEGG: cro:ROD_25421 hypothetical protein.
 
  
  0.994
ADO50032.1
4-hydroxyproline epimerase; KEGG: cro:ROD_25441 putative hydroxyproline-2-epimerase; PFAM: proline racemase; Belongs to the proline racemase family.
 
  
 0.992
ADO50030.1
PFAM: dihydrodipicolinate synthetase; KEGG: cro:ROD_25481 putative dihydrodipicolinate synthetase; Belongs to the DapA family.
 
  
  0.961
ADO50031.1
KEGG: kva:Kvar_4457 transcriptional regulator, AraC family; PFAM: PAS fold-4 domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
 
     0.724
hisI
phosphoribosyl-ATP diphosphatase; KEGG: enc:ECL_03346 hypothetical protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family.
  
    0.688
ADO46638.1
KEGG: enc:ECL_04743 nitrite reductase small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit.
  
 
 0.671
ADO48204.1
PFAM: copper resistance protein CopC; KEGG: cko:CKO_01125 hypothetical protein.
  
 
   0.656
dadA
FAD dependent oxidoreductase; Oxidative deamination of D-amino acids.
  
 
 0.603
ADO49489.1
PFAM: FAD dependent oxidoreductase; KEGG: kpu:KP1_1462 hypothetical protein.
 
 
 0.598
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.