STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO50068.1Putative transcriptional regulator, Nlp; KEGG: ctu:Ctu_05280 sugar fermentation stimulation protein B. (84 aa)    
Predicted Functional Partners:
ADO48494.1
PFAM: protein of unknown function DUF1471; KEGG: kpu:KP1_2535 hypothetical protein.
  
     0.695
ADO49575.1
PFAM: Haemolysin expression modulating family protein; KEGG: sdy:SDY_0459 hemolysin expression-modulating protein.
  
     0.565
ADO50069.1
PFAM: protein of unknown function DUF1294; KEGG: sed:SeD_A1709 cyanate transport.
       0.503
ADO48680.1
KEGG: ent:Ent638_1944 putative outer membrane lipoprotein.
  
     0.455
ADO46556.1
PFAM: protein of unknown function DUF1145; KEGG: kva:Kvar_0269 protein of unknown function DUF1145.
  
     0.449
ADO47971.1
PFAM: porin Gram-negative type; KEGG: spe:Spro_3264 outer membrane porin protein C.
  
     0.449
ADO48069.1
PFAM: Tol-Pal system TolA; KEGG: sgl:SG0885 colicin import protein TolA.
  
     0.433
ADO48702.1
PFAM: porin Gram-negative type; KEGG: spe:Spro_3264 outer membrane porin protein C.
  
     0.429
ADO48688.1
PFAM: porin Gram-negative type; KEGG: kpn:KPN_01445 outer membrane pore protein N, non-specific; Belongs to the Gram-negative porin family.
  
     0.410
ADO46823.1
KEGG: cro:ROD_46781 hypothetical protein; Belongs to the UPF0306 family.
  
     0.407
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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