Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO50070.1PFAM: protein of unknown function DUF1219; KEGG: ebw:BWG_2400 CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system. (98 aa)    
Predicted Functional Partners:
ADO50071.1
PFAM: YagBYeeUYfjZ family protein; KEGG: ebw:BWG_2399 CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin-antitoxin system.
  
  
 0.776
ADO50072.1
PFAM: protein of unknown function DUF987; KEGG: ecm:EcSMS35_0309 hypothetical protein.
  
  
 0.735
ADO50073.1
KEGG: ecm:EcSMS35_0308 RadC family DNA repair protein; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.700
ADO50074.1
PFAM: Antirestriction protein; KEGG: ecm:EcSMS35_0307 antirestriction protein.
       0.695
ADO50075.1
PFAM: protein of unknown function DUF905; KEGG: ebw:BWG_0231 CP4-6 prophage; hypothetical protein.
  
    0.504
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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