STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO50099.1KEGG: see:SNSL254_A3259 hypothetical protein. (349 aa)    
Predicted Functional Partners:
ADO50098.1
PFAM: Pili assembly chaperone, N-terminal; KEGG: set:SEN2871 probable fimbrial chaperone protein.
     
 0.823
ADO50097.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: sew:SeSA_A3198 fimbrial usher protein.
     
 0.640
ADO50101.1
KEGG: see:SNSL254_A3257 hypothetical protein.
     
 0.579
ADO50100.1
PFAM: Transcription regulator CaiF; KEGG: sec:SC2964 hypothetical protein.
       0.470
ADO50096.1
PFAM: Fimbrial protein domain-containing protein; KEGG: sew:SeSA_A3199 fimbrial protein.
     
 0.446
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.