Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADO50111.1Helicase domain protein; KEGG: cps:CPS_2941 putative DEAD/DEAH box helicase; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; helicase domain protein. (1478 aa)    
Predicted Functional Partners:
ADO50106.1
KEGG: cps:CPS_2946 SNF2 family protein; PFAM: SNF2-related protein; SMART: DEAD-like helicase.
 
     0.902
ADO50107.1
KEGG: cps:CPS_2945 putative DEAD/DEAH box helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: helicase domain protein; DEAD-like helicase.
 
   
 0.853
ADO50110.1
KEGG: cps:CPS_2942 hypothetical protein.
       0.813
ADO50109.1
KEGG: cps:CPS_2943 hypothetical protein.
       0.811
ADO50108.1
KEGG: cps:CPS_2944 hypothetical protein.
       0.799
ADO50112.1
KEGG: cps:CPS_2940 hypothetical protein.
       0.798
ADO50113.1
KEGG: cps:CPS_2939 hypothetical protein.
       0.785
ADO50115.1
KEGG: eoh:ECO103_5064 hypothetical protein.
  
     0.772
ADO50114.1
TIGRFAM: DGQHR domain protein; KEGG: eoh:ECO103_5065 hypothetical protein.
  
     0.766
mutM
formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
  
  
 0.566
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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