Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO50113.1KEGG: cps:CPS_2939 hypothetical protein. (721 aa)    
Predicted Functional Partners:
ADO50112.1
KEGG: cps:CPS_2940 hypothetical protein.
       0.812
ADO50108.1
KEGG: cps:CPS_2944 hypothetical protein.
       0.802
ADO50109.1
KEGG: cps:CPS_2943 hypothetical protein.
       0.802
ADO50110.1
KEGG: cps:CPS_2942 hypothetical protein.
       0.802
ADO50111.1
Helicase domain protein; KEGG: cps:CPS_2941 putative DEAD/DEAH box helicase; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; helicase domain protein.
       0.785
ADO50106.1
KEGG: cps:CPS_2946 SNF2 family protein; PFAM: SNF2-related protein; SMART: DEAD-like helicase.
       0.770
ADO50107.1
KEGG: cps:CPS_2945 putative DEAD/DEAH box helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: helicase domain protein; DEAD-like helicase.
       0.770
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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