Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO50179.1PFAM: AIG2 family protein; KEGG: kva:Kvar_4631 AIG2 family protein. (114 aa)    
Predicted Functional Partners:
ADO50181.1
Surface antigen (D15); KEGG: cko:CKO_03610 hypothetical protein; manually curated; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein.
 
   
 0.887
ADO50180.1
PFAM: protein of unknown function DUF490; KEGG: cko:CKO_03609 hypothetical protein.
 
   
 0.872
ADO49332.1
Cyd operon protein YbgE; KEGG: enc:ECL_02996 hypothetical protein; TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE.
  
     0.649
ADO49987.1
PFAM: Virulence factor, haemolysin regulator; KEGG: cro:ROD_49101 hypothetical protein.
  
     0.611
ADO48083.1
PFAM: Protein of unknown function DUF2594; KEGG: kva:Kvar_1694 protein of unknown function DUF2594.
  
     0.603
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.577
ADO46874.1
KEGG: cko:CKO_04501 hypothetical protein.
  
     0.568
uspB
PFAM: Universal stress protein B; KEGG: kva:Kvar_0242 universal stress protein B.
  
     0.567
ADO48459.1
PFAM: Haemolysin expression modulating family protein; KEGG: ctu:Ctu_20090 OriC-binding nucleoid-associated protein.
  
     0.545
ADO50261.1
Virulence-related outer membrane protein; KEGG: eic:NT01EI_3043 hypothetical protein; manually curated; PFAM: virulence-related outer membrane protein.
  
     0.529
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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