STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytfEIron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters damaged by oxidative and nitrosative stress conditions. (220 aa)    
Predicted Functional Partners:
hmp
Globin; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.
  
  
 0.964
ADO48827.1
KEGG: ctu:Ctu_21530 hypothetical protein.
  
  
 0.762
ADO47289.1
PFAM: flavodoxin/nitric oxide synthase; Rubredoxin-type Fe(Cys)4 protein; KEGG: cko:CKO_04064 anaerobic nitric oxide reductase flavorubredoxin.
  
  
 0.638
ADO50192.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: cko:CKO_03621 hypothetical protein.
       0.595
ADO49165.1
PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: enc:ECL_02779 NADH-dependent HCP oxidoreductase.
 
  
 0.580
ADO46789.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: kva:Kvar_0505 protein of unknown function DUF6 transmembrane.
  
     0.479
ADO47042.1
PFAM: protein of unknown function DUF1971; KEGG: kpu:KP1_3657 putative tellurite resistance protein.
   
  
 0.476
ADO48669.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit; KEGG: enc:ECL_02149 phenylacetate-CoA oxygenase, NAD(P)H oxidoreductase component; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein.
  
  
 0.445
ADO49057.1
Ferredoxin; Converts carnitine to trimethylamine and malic semialdehyde.
  
  
 0.445
ADO50191.1
KEGG: ent:Ent638_0382 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
       0.439
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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