Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO50239.1PFAM: transposase IS4 family protein; KEGG: pct:PC1_1038 transposase IS4 family protein. (444 aa)    
Predicted Functional Partners:
ADO49185.1
TIGRFAM: general secretion pathway protein C; KEGG: cko:CKO_02229 hypothetical protein.
  
     0.728
YdjY
ydjY; KEGG: ydjY; uncharacterized protein YdjY.
  
     0.640
ADO49180.1
KEGG: cko:CKO_02224 hypothetical protein.
  
     0.621
ADO49179.1
KEGG: cko:CKO_02223 hypothetical protein; TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J.
  
     0.565
frdD
Fumarate reductase D subunit; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.
       0.513
frdC
Fumarate reductase subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.
       0.504
ADO50275.1
KEGG: ssn:SSON_0513 hypothetical protein.
  
     0.502
ADO50235.1
Manually curated; TIGRFAM: fumarate reductase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: enc:ECL_00558 fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
       0.494
ADO50236.1
Manually curated; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: enc:ECL_00557 fumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
       0.494
ADO47176.1
KEGG: kpe:KPK_0880 hypothetical protein.
  
     0.426
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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