Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO50264.1KEGG: kpn:KPN_01157 hypothetical protein. (214 aa)    
Predicted Functional Partners:
ADO50265.1
Sigma 54 interacting domain protein; KEGG: pct:PC1_3954 PTS system transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; PTS system fructose subfamily IIA component; SMART: AAA ATPase.
       0.457
ADO50263.1
PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: kva:Kvar_4479 polypeptide-transport-associated domain protein ShlB-type.
     
 0.424
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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