STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO50273.1PFAM: General secretory system II protein E domain protein; KEGG: eok:G2583_0723 bacteriophage N4 adsorption protein B. (744 aa)    
Predicted Functional Partners:
ADO50274.1
PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ebr:ECB_00522 bacteriophage N4 receptor, outer membrane subunit.
 
  
 0.963
ADO50275.1
KEGG: ssn:SSON_0513 hypothetical protein.
 
   
 0.954
ADO47050.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: efe:EFER_1580 cAMP phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein.
 
  
 0.639
ADO50610.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: ect:ECIAI39_3127 putative sugar phosphate isomerase.
  
     0.622
ADO50332.1
KEGG: ses:SARI_04626 hypothetical protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Pertactin; Autotransporter beta- domain protein.
  
     0.603
ADO48828.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; Hpt domain protein; KEGG: kpu:KP1_2376 hypothetical protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver.
  
 
 0.598
ADO46765.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; KEGG: enc:ECL_04591 aerobic respiration control sensor protein ArcB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; Hpt domain protein.
  
 
 0.593
ADO49837.1
PFAM: polysaccharide deacetylase; KEGG: kpe:KPK_4598 polysaccharide deacetylase domain protein.
 
  
 0.586
ADO46404.1
PFAM: O-antigen polymerase; KEGG: ctu:Ctu_41260 hypothetical protein.
 
   
 0.574
arnD
Polysaccharide deacetylase; Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the polysaccharide deacetylase family. ArnD deformylase subfamily.
  
  
 0.530
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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