Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO50274.1PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ebr:ECB_00522 bacteriophage N4 receptor, outer membrane subunit. (990 aa)    
Predicted Functional Partners:
ADO50275.1
KEGG: ssn:SSON_0513 hypothetical protein.
 
 
 0.977
ADO50273.1
PFAM: General secretory system II protein E domain protein; KEGG: eok:G2583_0723 bacteriophage N4 adsorption protein B.
 
  
 0.973
ADO50610.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: ect:ECIAI39_3127 putative sugar phosphate isomerase.
  
     0.773
ADO50609.1
PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_4297 putative transporter.
  
     0.755
ADO46988.1
PFAM: Fimbrial protein domain-containing protein; KEGG: Yqi fimbriae subunit YgiL.
  
     0.613
ADO46349.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eum:ECUMN_0355 putative DNA-binding transcriptional regulator.
  
     0.558
ADO46761.1
Anaerobic c4-dicarboxylate antiporter, DcuC family; KEGG: ebr:ECB_03087 putative cryptic C4-dicarboxylate transporter DcuD; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like.
  
     0.549
ADO46431.1
Transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; KEGG: efe:EFER_2778 putative regulatory protein.
  
     0.548
ADO50611.1
Transcriptional regulator, GntR family; KEGG: eoj:ECO26_4718 putative DNA-binding transcriptional regulator; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH.
  
     0.548
ADO47271.1
KEGG: ebw:BWG_0250 putative glucosyltransferase; manually curated; PFAM: glycosyl transferase family 2.
 
  
 0.517
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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