Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO50286.1Transcriptional regulator, AraC family; KEGG: ect:ECIAI39_0540 DNA-binding transcriptional activator of porin biosynthesis; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (254 aa)    
Predicted Functional Partners:
ADO50287.1
KEGG: efe:EFER_3037 transcriptional regulator GadE.
  
  
 0.578
ADO48202.1
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ses:SARI_01069 hypothetical protein.
  
     0.576
ADO49081.1
PFAM: Protein of unknown function DUF2057; KEGG: sew:SeSA_A1140 hypothetical protein; Belongs to the UPF0319 family.
  
     0.572
ADO50519.1
Transcriptional regulator, AraC family; KEGG: efe:EFER_3809 putative DNA-binding transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.518
ADO47586.1
Transcriptional regulator, AraC family; Manually curated; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cko:CKO_00349 transcriptional regulator EutR; SMART: Helix-turn-helix, AraC domain.
  
     0.501
ADO46404.1
PFAM: O-antigen polymerase; KEGG: ctu:Ctu_41260 hypothetical protein.
  
     0.466
fucK
L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family.
  
     0.440
fucI
L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
  
     0.439
ADO50285.1
KEGG: sew:SeSA_A4551 biodegradative arginine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein.
  
    0.416
ADO46865.1
KEGG: seg:SG3135 putative membrane transport protein.
  
     0.402
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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